PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT19877
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 290aa    MW: 32410.9 Da    PI: 6.1806
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT19877genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY60.62.8e-19136197259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
               +D ++WrKYG K++  ++fpr YYrC ++   +Cp+kk v+++ ++dp ++ +t  ++H+++
  EMT19877 136 NDRFHWRKYGEKKILHADFPRLYYRCGYSdehKCPAKKYVQQQnSRDPPMFLVTLINDHTCD 197
               79*************************998899*******875167*************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.0E-20127197IPR003657WRKY domain
PROSITE profilePS5081114.963130199IPR003657WRKY domain
SuperFamilySSF1182902.48E-19130197IPR003657WRKY domain
SMARTSM007742.9E-27135198IPR003657WRKY domain
PfamPF031061.7E-20136197IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MAMRPKSEMS PPPAPPSPSD QRDAVIEELR KGSQLAEFLR QQGELIPEDS RRDAALANVS  60
DITTALASSL SVLQSEKEQY SSSSSSYDPG HASGPSGGGM RNGPVARSRN RKAKHRRGTY  120
GEELPIKEIL TEAPENDRFH WRKYGEKKIL HADFPRLYYR CGYSDEHKCP AKKYVQQQNS  180
RDPPMFLVTL INDHTCDTLF PDEDQDQPPS SSSSPNNSQV LDFSKASLSS AVGVSRLKKE  240
EDADMSVTVP SYNYTYDELS SSSLPFLSPK QWEMEMEVKS LFRRHSGDGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109116NRKAKHRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010233189.21e-117PREDICTED: WRKY transcription factor 55-like
TrEMBLR7WBH50.0R7WBH5_AEGTA; Putative WRKY transcription factor 70
STRINGMLOC_11088.11e-170(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-17WRKY DNA-binding protein 70